PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16632.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SRS

Protein Properties

Length: 368aa MW: 39051.8 Da PI: 7.5224

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	218.3	1.7e-67	129	289	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa............aeaaskrkrel.......kskk 82 g++sCqdCGnqakkdCah+RCRtCCksrgf+C+thvkstWvpaa rr+rqqqlaa+++++++++ +e + + ++ PIN16632.1 129 GGGISCQDCGNQAKKDCAHMRCRTCCKSRGFQCQTHVKSTWVPAAERRKRQQQLAALQQQQQNQQqeqrrethqqthRE--------SggkrhreNPSA 219 5789**************************************************99988877755554444333222........255443324666 PP DUF702 83 qsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++l +t+++++ + le ++P+evsseavfrcvrvs++dd+e+++aYqtav+i GhvfkG+LydqG+e+ PIN16632.1 220 SNSLVCTRIPTSM--SGLELGNFPQEVSSEAVFRCVRVSGIDDNEDQFAYQTAVNICGHVFKGLLYDQGTES 289 6667777776664..5588889*********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MAGFFSLGGG LAGGGRGTGG AGGGGGTNSN PDQESTSHNH PEINPESWFL FRNEEIPYKG 60 FELWQPHPQP QHHHQAENFL QRSGGVNPLQ DLYASAGGLA VGPSRGSGFN ISDDQSPRSG 120 FSMMRSSAGG GISCQDCGNQ AKKDCAHMRC RTCCKSRGFQ CQTHVKSTWV PAAERRKRQQ 180 QLAALQQQQQ NQQQEQRRET HQQTHRESGG KRHRENPSAS NSLVCTRIPT SMSGLELGNF 240 PQEVSSEAVF RCVRVSGIDD NEDQFAYQTA VNICGHVFKG LLYDQGTESQ YMAGETSSGG 300 GSISAGGAAA AQQLNLIAGT SATATSTPNT SAAGGSATAP SPFLDPSLYP APISSFIAGT 360 QFFPPPRS

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MAGFFSLGGG LAGGGRGTGG AGGGGGTNSN PDQESTSHNH PEINPESWFL FRNEEIPYKG  60
FELWQPHPQP QHHHQAENFL QRSGGVNPLQ DLYASAGGLA VGPSRGSGFN ISDDQSPRSG  120
FSMMRSSAGG GISCQDCGNQ AKKDCAHMRC RTCCKSRGFQ CQTHVKSTWV PAAERRKRQQ  180
QLAALQQQQQ NQQQEQRRET HQQTHRESGG KRHRENPSAS NSLVCTRIPT SMSGLELGNF  240
PQEVSSEAVF RCVRVSGIDD NEDQFAYQTA VNICGHVFKG LLYDQGTESQ YMAGETSSGG  300
GSISAGGAAA AQQLNLIAGT SATATSTPNT SAAGGSATAP SPFLDPSLYP APISSFIAGT  360
QFFPPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	9e-71	SRS family protein