PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16664.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 347aa    MW: 38336.7 Da    PI: 6.404
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B31079.2e-341142221100
                 EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 f+k ltpsdv+k++rlv+pk++ae+h         g++ e++  l++ede g+sW+++++y+++s++yvltkGW++Fvk+++L++gD+vvF +++ + +
  PIN16664.1 114 FEKPLTPSDVGKLNRLVIPKQHAEKHfplnnggggGESGENGLLLSFEDEVGKSWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDIVVFLRHRVDAG 212
                 99*******************************98555567889************************************************8777*** PP

                 ..EEEEE-SS CS
          B3  91 elvvkvfrks 100
                 +l+++++r++
  PIN16664.1 213 RLFIGWRRRN 222
                 *******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MSINHYSSDH WWSHYVMDSS ARTSSSNQKP TFISNNSTHF VPNSTATFWL APDHHQAGGE  60
AMVCGKNSAF GFNLNNEDEE ELQSTADDGE NCNNSTSREL EQDQEEEIPR EPLFEKPLTP  120
SDVGKLNRLV IPKQHAEKHF PLNNGGGGGE SGENGLLLSF EDEVGKSWRF RYSYWNSSQS  180
YVLTKGWSRF VKEKRLDAGD IVVFLRHRVD AGRLFIGWRR RNSGGGQDSG GVAPPTATVG  240
PGGGGWSRVY YSGRPYHQGP SSLPYQLPDQ CLHAGSSVSP NQTTSGNSKR LRLFGVNLEC  300
QADDSEPSTP VGSPMSSQGQ AHQHPYHQYY SNHMDIGFSG ADVHRQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.13e-63B3 family protein