PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16689.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 287aa    MW: 32420 Da    PI: 5.1435
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.9e-202978255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  PIN16689.1 29 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 78
                69****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MDNCRKSPLK PWKKGPARGK GGPQNAMCEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAAMAYD EAARRLYGPE AYLNLPHLRC NFNPLNKSQK FKWFPSNNFV SMLPSTGLLN  120
LNAQPSVHVI HQRLQELKKT GVLGQDSSSS SSSSDPKNDV QNVSEQAQVD LPEAKEKDTE  180
LSRADKVISG EEKPQIDLNE FLEQLGVLKR EDPQPSVSDI NKSFTEIEES SFKENEDGFH  240
TLEEGSFNWD TLSEIAGADI HLGAEENIFD GHDSTEEHTF PPSIWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.18e-76ERF family protein