PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16698.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YA
Protein Properties Length: 271aa    MW: 30041.5 Da    PI: 9.1888
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16698.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1032.8e-32135191158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq Rak+e e+k+ ++srkpylheSRh hAlrR+Rg+gGrF
  PIN16698.1 135 EEPVYVNAKQYHGILRRRQLRAKAELENKV-TRSRKPYLHESRHLHALRRARGCGGRF 191
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MQRQPDKKEQ HEFDAKGYDL FTAGAQCWNY GIGSDFMSPN VLSGSTLDVA SANQINTCWG  60
SPSCESQANG GQISVISDSV CRREHGSVAS SMVSPVMGQY LMQEPQRDHI GSLNMVPELN  120
AVPHYRTTSP CVLPEEPVYV NAKQYHGILR RRQLRAKAEL ENKVTRSRKP YLHESRHLHA  180
LRRARGCGGR FINTKKSDSA ADKATRDKGN GAGDSSPLKP LRPADSGYAS MGSSGLGEPS  240
TSRNEFKRFS LDESKDVEFF QWSRHKSFLS Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.13e-33NF-YA family protein