PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16766.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 234aa    MW: 25754.3 Da    PI: 4.7091
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16766.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95e-183282155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr +k +g++v+eIr p++   r r++lg+++tae+Aa+a +aa  +l+g
  PIN16766.1 32 CKYKGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDTAEKAARAFDAALFCLRG 82
                79*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MVKSSVNQKE QLSSSSATIL QRVSETSSSS SCKYKGVRKR KWGKYVSEIR LPNSRERIWL  60
GSYDTAEKAA RAFDAALFCL RGRNAKFNFP DNPPEIVNGR SMTPAEIQVA AARFAHSGSG  120
PRSVGTSGRV DNLDSQSDSL SSSEQLQHAE SPCQSVSDGA AQVDTEITEI PLDDAFLDHL  180
LTLGPENNVP DFGLFSGFDN FSGDFLMSSS PNIDYWPNNN EESLYSETSF LWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13541KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-57ERF family protein