PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16819.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRF

Protein Properties

Length: 353aa MW: 38686 Da PI: 8.4641

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16819.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	82.2	4.5e-26	128	171	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v+ g+k+CErH+hrgr+rsrk++e PIN16819.1 128 DPEPGRCRRTDGKKWRCSRDVVVGQKYCERHMHRGRNRSRKPVE 171 79***************************************987 PP
2	QLQ	45.7	2e-16	60	95	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+F+ +Q+q+L+ Q+l++++++a++ vPpeLl ++ PIN16819.1 60 SYFSLSQWQELELQALIFRHMIAGASVPPELLNLVK 95 78*****************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MDFNLKQWRN IESEQITPLP RNTIDESPSS APLPLFVPHS TTNPSAYPSD HSTKFPKMGS 60 YFSLSQWQEL ELQALIFRHM IAGASVPPEL LNLVKKSLIN SPSSPFYLSQ YYQPALLQSG 120 YWGRAAMDPE PGRCRRTDGK KWRCSRDVVV GQKYCERHMH RGRNRSRKPV EIPTSTPYGG 180 GAGGTTLKTN HSIISGGGGG GSPHFTLSGT SHSTNLFHLD ERPSDSIIET KGPFEAENES 240 QSNGRTLRFF DDWPKSLHDT DNSSTNLSIS MPGSDFSLKL GTGNGDENNT HIASNQRDKP 300 QLNWGMNWET NPVAPMGGPL AEALRSSGSG LSPTSVLHRL GRAPGSEGSY VSS

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MDFNLKQWRN IESEQITPLP RNTIDESPSS APLPLFVPHS TTNPSAYPSD HSTKFPKMGS  60
YFSLSQWQEL ELQALIFRHM IAGASVPPEL LNLVKKSLIN SPSSPFYLSQ YYQPALLQSG  120
YWGRAAMDPE PGRCRRTDGK KWRCSRDVVV GQKYCERHMH RGRNRSRKPV EIPTSTPYGG  180
GAGGTTLKTN HSIISGGGGG GSPHFTLSGT SHSTNLFHLD ERPSDSIIET KGPFEAENES  240
QSNGRTLRFF DDWPKSLHDT DNSSTNLSIS MPGSDFSLKL GTGNGDENNT HIASNQRDKP  300
QLNWGMNWET NPVAPMGGPL AEALRSSGSG LSPTSVLHRL GRAPGSEGSY VSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	7e-72	GRF family protein