PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16831.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 306aa    MW: 33861 Da    PI: 9.701
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.83.5e-19172205134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C+ C+ttkTplWR+gp g+k+LCnaCG+++rk +
  PIN16831.1 172 CADCNTTKTPLWRSGPKGPKSLCNACGIRQRKAR 205
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MDLNSTPSPI SDDHHDHHHY LYPNINSSSV SCFIFFNSST QDHTGLYDHH QLYPPQHQSD  60
DNYAYHGGST HEIKNKVESG IKLTLWKKDD SHKKESTPPP PPPPPPPHEK GNNPTKWMSS  120
KVRLMQKMKN PDRAPPDKTD DNQTLQTSSS SMETDLSSNS SSYNNNSPIR VCADCNTTKT  180
PLWRSGPKGP KSLCNACGIR QRKARRAMAA VAAAANGRTD QPVPAVKIKV QLKEKNMKNG  240
LKKRCKTPIS ASTSSGGSSS YGQKKIGFED FFINLSKNLS FHRVFPEDEK DAAILLMALS  300
SGLIHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.12e-32GATA family protein