PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16835.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 259aa    MW: 28713 Da    PI: 8.3672
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.25.9e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEd  l+++ +++G+g +W + +++ g+ R++k+c++rw++yl
       PIN16835.1 14 RGTWSPEEDSTLKNYLQKHGTGgNWISLPQKAGLQRCGKSCRLRWLNYL 62
                     89*********************************************97 PP
2Myb_DNA-binding476.1e-1569111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T+eE+ +++ ++ + G++ W+ Ia++++ gRt++++k++w++
       PIN16835.1  69 GGFTQEEENIIYSLHSKIGSR-WSVIASHLQ-GRTDNDVKNYWNT 111
                      569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MGRSPCCDKS KVKRGTWSPE EDSTLKNYLQ KHGTGGNWIS LPQKAGLQRC GKSCRLRWLN  60
YLRPDIKHGG FTQEEENIIY SLHSKIGSRW SVIASHLQGR TDNDVKNYWN TKLKKKLMAV  120
NCNPPSATAS GAAAATTAAT GTTTTTAIFE KTTTLRASTS SMATFPEPYE PINSTFPKFI  180
LEGSSNCSSS ANNGSPFSQS QQESSPFRPW DESHHGVKGI PMDQYSYEVL GGIWFQEESI  240
GFHSNEDLFS IFHVDSNKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.11e-72MYB family protein