PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16917.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 257aa MW: 28037.3 Da PI: 6.4237

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.0001	12	34	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C k+F++ L H r H PIN16917.1 12 FQCPFCEKRFKNGKALGGHKRIH 34 89*****************9998 PP
2	zf-C2H2	18.6	5e-06	61	82	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kCp C++ F+ L+ H+r+H PIN16917.1 61 KCPVCDQAFPAEKALHGHMRKH 82 8********************9 PP
3	zf-C2H2	12.7	0.00038	184	206	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C +C+++F++ L H + H PIN16917.1 184 YVCDICDRRFKSYQALGGHKSHH 206 9***********99998887766 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MSNEAGENEA AFQCPFCEKR FKNGKALGGH KRIHLLQAKN ESGETSNPEV IPDAESVETL 60 KCPVCDQAFP AEKALHGHMR KHPDRSWRGM KPPVPAGEDV ENNLADLSQE DDEMSSDDLP 120 PNGWPKTGRR SGHGKAPIIE AKKKKVEASN SGIKIGGGVS LENPKLGPES SNRGKKKLIQ 180 KRMYVCDICD RRFKSYQALG GHKSHHGSRV RVSGEEGASG TAACGTAVPD VEQEIRDQST 240 VVSFEFDLNE LPPEDDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56200.1	1e-15	C2H2 family protein