PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16982.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 245aa    MW: 26769.5 Da    PI: 9.3921
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.7e-135197354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++h+e+ErrRR+riN  +++L+++lP+a      K +Ka+ L +Av+ +++L
  PIN16982.1 51 TSHKEAERRRRKRINGHIATLKSILPNA-----IKTDKASLLGEAVRRVREL 97
                79*************************9.....79***********999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MYSVPSFYEL GSCSESYDIL EGLLSTSATE GEEGNLSPKS MAEAKAVAAS TSHKEAERRR  60
RKRINGHIAT LKSILPNAIK TDKASLLGEA VRRVRELKKA TSELTGIDNN NNKNNYSNDS  120
TSNTPSLKFM FPTETDELKV CHCNEGNNNP GLIKATLCCE DRPEIVLDLI QALKSVEAKV  180
IRAEMSTVGG RTKSVLWVRM AVGSESDVGL GRLRRALKMV MDKSTLLAGS GQGLPGNKRA  240
RYYQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-40bHLH family protein