PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17011.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 239aa    MW: 25327.2 Da    PI: 9.6954
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.22.3e-30160159
                ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                ++Dg++WrKYGqK  kg+++pr+YYrCt++ +Cpv+k+v+r+a+d +++++ Yeg+Hnh+
  PIN17011.1  1 MNDGCQWRKYGQKIAKGNPCPRAYYRCTMSpSCPVRKQVQRCAQDMSILTTSYEGTHNHP 60
                58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MNDGCQWRKY GQKIAKGNPC PRAYYRCTMS PSCPVRKQVQ RCAQDMSILT TSYEGTHNHP  60
LPPSAASLAS ATSAAAAMLN CGSTTSSQLH SGSATSSATP NLHTFNFPSS NRLTARTSIT  120
TSQSHPTVVL DLTSANHTSS LDNYSSSSLF STSTHNPQLS SYDKLIQASQ QGILSDKIAA  180
ATKAITSNPK FQSALAAAIT SFVGNGSITN LDQERKSFKG GENITFSQLF MASGISRAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.12e-42WRKY family protein