PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17047.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 251aa    MW: 28469.2 Da    PI: 5.2907
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.41.5e-145396755
                HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                  Er+RR+++N+++  Lr+++P+      +K++Ka+iL+ A+e+IksLq
  PIN17047.1 53 VSERNRRKKLNERLYALRSVVPNI-----TKMDKASILRDAIEHIKSLQ 96
                57*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MENIDDEYRN YWETNMFLQT EELDGYFDEV ISTYYDSSSP DGIQSSLASK NIVSERNRRK  60
KLNERLYALR SVVPNITKMD KASILRDAIE HIKSLQSEEK RIQTEISELE SGMSSSNSAN  120
FDFDAEATTF SNSKTKRKRL MERCNDSALS RLATSSPIEV LELRISNMGE KTIVVSLTCN  180
KRRDTMIKLC KAFESLKLKV VTCSIHAFSG NLLKTLFLEG DEEEKDALRS KIEAAIAALN  240
DPNSPMSCTK N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.17e-81bHLH family protein