PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17051.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 291aa    MW: 32717.2 Da    PI: 7.1775
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17051.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.31.2e-5281321128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeelv++yL+++++++++ +  +i+e+d+yk++Pw+Lp k+  +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ +   ++
  PIN17051.1   8 LPPGFRFHPTDEELVMHYLCRRCASQSIAV-PIIAEIDLYKYDPWELPGKALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGH--PKA 103
                 79*************************999.88***************7777789*************************************99..778 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 vg+kk Lvfy+g+ap+gekt+W+mheyrl
  PIN17051.1 104 VGIKKALVFYSGKAPRGEKTNWIMHEYRL 132
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MAAADLHLPP GFRFHPTDEE LVMHYLCRRC ASQSIAVPII AEIDLYKYDP WELPGKALYG  60
EKEWYFFSPR DRKYPNGSRP NRAAGSGYWK ATGADKPIGH PKAVGIKKAL VFYSGKAPRG  120
EKTNWIMHEY RLADVDRSAR KKNNSLRLDD WVLCRIYNKK GTIERQPQNV SNKKMTSAVT  180
TEEDIKPVIL TSVPEGSPMV YEDFMYLDAS DSMPRLHTDS SCSEHVLSPE VESAPKLAEW  240
EKSALDFPFS YMDATASASA AAGGALMGSQ FQGNYPMEPL QDVFAYITKP F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-132NAC family protein