PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17223.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WOX

Protein Properties

Length: 273aa MW: 30671.3 Da PI: 5.8627

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65	1.1e-20	90	150	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + +ps+++++e++++l +++e++V++WFqNrRa+ k+ PIN17223.1 90 RQRWTPTPMQLQILERIFDQgIGTPSKQKIKEITTELsqhgQISETNVYNWFQNRRARSKR 150 89***************99************************************97 PP
2	Wus_type_Homeobox	103.9	1.1e-33	90	152	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPtp Q++iLe+++++G+ tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq PIN17223.1 90 RQRWTPTPMQLQILERIFDQGIGTPSKQKIKEITTELSQHGQISETNVYNWFQNRRARSKRKQ 152 89***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MMEWEKQPPQ QAEDPSGGGG GGGGGMFVKV MTDEQMEVLR KQIAVYATIC EQLVELHKSL 60 TSQTDLAGVR LGNLYCDPLI TSGAHKITGR QRWTPTPMQL QILERIFDQG IGTPSKQKIK 120 EITTELSQHG QISETNVYNW FQNRRARSKR KQQAAQPNNG ESEVETEVES PNDKKTKPEE 180 FQPHHILSTR TEDVCFQNHP QPTSAVHSVD PHASKPEPML PPEGSSKFNG NFGQMPFYGN 240 MLSNPRMDQF IGKIEVPGNY NPYLQQDDYN MDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	144	152	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	3e-72	WOX family protein