PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17319.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 207aa MW: 23686.2 Da PI: 4.75

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	68.2	2.3e-21	12	157	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpk........kvkaeekewyfFskrdkkya......tgkrknratk..sg 81 lp G+rF+Ptd el ++yL+kkv+++++ +++ i+ + y++ P+ + ++++e +e+ k + + + ++++k r++ g PIN17319.1 12 LPIGYRFDPTDLELATFYLQKKVSSRPVVGDDIkeIDAHEFYSHSPEAIGIyrsqdhdlTMEQEGEEVPMIGKDRIEMNeefhkqEENQKIRIVGdgIG 110 699**********************666432236666799999999963356677664444444443222222211112211133455554444479 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 yW+++gk++ ++++ g++ k +++++g+ ++g++t+W ++ey+l PIN17319.1 111 YWRSSGKKEVIYDAMGRAYAFKIHFIYFSGSPNRGKQTHWRLEEYHL 157 9******************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MSFGDGICPI ELPIGYRFDP TDLELATFYL QKKVSSRPVV GDDIKEIDAH EFYSHSPEAI 60 GIYRSQDHDL TMEQEGEEVP MIGKDRIEMN EEFHKQEENQ KIRIVGDGIG YWRSSGKKEV 120 IYDAMGRAYA FKIHFIYFSG SPNRGKQTHW RLEEYHLISG EGSCDGGRDD HDDGGDPDNG 180 GDERRNSKID DWVLGRITRG RNYASFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	1e-14	NAC family protein