PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17339.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 568aa MW: 63677.3 Da PI: 7.3422

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17339.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.3	1e-11	409	455	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er RR+++N++f Lr ++P+ + K++Ka+ L ++ YI +Lq PIN17339.1 409 NHVEAERMRREKLNQRFYALRAVVPNiS------KMDKASLLGDTIAYITELQ 455 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MGDIGWNYEN KAMAATVLGT KAFDYLISSS ISAECSLMAI GNDENLQHKL SDLVEHPNSA 60 NFCWNYAIFW QLSKSKTGDL VLGWGDGCCR EPHEDEDSEV TRILNIRLEN ESHQRMRKRV 120 LQKLHLFFGG TNEDSYAFGL DKVTDVEMFF LASMYFSFPK GEGGPGRCFA SGKHVWLSNA 180 LKPSIDYCVR SFLAKSAGMQ TIVLIPTDVG VVELGSVRCI PENLELLKVI RSPFLSLSVF 240 LRAKKAAALA ALTNKNDGSI SSLVTSNHAE VAPKIFGQDL YSDRVQFRDR GDAKGNGDRP 300 PITNTRNGFQ WPQFRGNTLQ SYSPEALTKI LNERVNGERE EYRLNDSQLQ KPAQKQIDFT 360 GVSSRSVISS VESEHSGVEI SCKEEWVGLD KRPRKRGRKP ANGRYEPLNH VEAERMRREK 420 LNQRFYALRA VVPNISKMDK ASLLGDTIAY ITELQKKLKE MECERESLQN EALVPEAKPN 480 MEMEVSASNI DIQAGHEEVT LRVSFPLDAH PVSRVLRAIK DAKGTIIEAK FATDSEKVFH 540 TLLVKLQGSE RLTKEKLIEA LSHESNSP

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MGDIGWNYEN KAMAATVLGT KAFDYLISSS ISAECSLMAI GNDENLQHKL SDLVEHPNSA  60
NFCWNYAIFW QLSKSKTGDL VLGWGDGCCR EPHEDEDSEV TRILNIRLEN ESHQRMRKRV  120
LQKLHLFFGG TNEDSYAFGL DKVTDVEMFF LASMYFSFPK GEGGPGRCFA SGKHVWLSNA  180
LKPSIDYCVR SFLAKSAGMQ TIVLIPTDVG VVELGSVRCI PENLELLKVI RSPFLSLSVF  240
LRAKKAAALA ALTNKNDGSI SSLVTSNHAE VAPKIFGQDL YSDRVQFRDR GDAKGNGDRP  300
PITNTRNGFQ WPQFRGNTLQ SYSPEALTKI LNERVNGERE EYRLNDSQLQ KPAQKQIDFT  360
GVSSRSVISS VESEHSGVEI SCKEEWVGLD KRPRKRGRKP ANGRYEPLNH VEAERMRREK  420
LNQRFYALRA VVPNISKMDK ASLLGDTIAY ITELQKKLKE MECERESLQN EALVPEAKPN  480
MEMEVSASNI DIQAGHEEVT LRVSFPLDAH PVSRVLRAIK DAKGTIIEAK FATDSEKVFH  540
TLLVKLQGSE RLTKEKLIEA LSHESNSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	391	399	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-180	bHLH family protein