PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17400.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 389aa MW: 41608.1 Da PI: 9.477

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.7	2.5e-39	93	198	4	112
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............. 88 k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLl qa+pai+++tgt++++a+++ ++s +ss+ + s++ PIN17400.1 93 VKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLHQAEPAIIAATGTGTIPANFStLNVSLRSSGITISAPpsksaplffggas 191 5899***************************************************************99976666666666333334434444444433 PP TCP 89 .....kaaksaakskksqksaasalnlak 112 + + PIN17400.1 192 gmlgfH----------------------H 198 333331......................2 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MQFMEPLTKN QGSSGNNSGH HEAASSLQLL SPHPHHHHSQ PEPSSGSGPV PPHGPFMGSI 60 SMQQSRTLAV SSASSTPTTS TNKDTNKNDS NAVKKPSKDR HTKVDGRGRR IRMPALCAAR 120 VFQLTRELGH KSDGETIEWL LHQAEPAIIA ATGTGTIPAN FSTLNVSLRS SGITISAPPS 180 KSAPLFFGGA SGMLGFHHQL TSSTSFGQDP DENYMRKRFR EDTTGAMSPK SGRSSVQDQE 240 QGTDPKPGSS QASSFIPGPA MWAVAPAAAN MANAFWMLPV TGGAATATVG QQEWQYRTAP 300 MQRIGGFEFS GAGRFNPVQL GSMVMQQPRP PVQQLGLSVS ESNIGMLASM NAYNSSNSRI 360 DLGMNLEHQH HQNQQQNSDS SDENPKDSK

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MQFMEPLTKN QGSSGNNSGH HEAASSLQLL SPHPHHHHSQ PEPSSGSGPV PPHGPFMGSI  60
SMQQSRTLAV SSASSTPTTS TNKDTNKNDS NAVKKPSKDR HTKVDGRGRR IRMPALCAAR  120
VFQLTRELGH KSDGETIEWL LHQAEPAIIA ATGTGTIPAN FSTLNVSLRS SGITISAPPS  180
KSAPLFFGGA SGMLGFHHQL TSSTSFGQDP DENYMRKRFR EDTTGAMSPK SGRSSVQDQE  240
QGTDPKPGSS QASSFIPGPA MWAVAPAAAN MANAFWMLPV TGGAATATVG QQEWQYRTAP  300
MQRIGGFEFS GAGRFNPVQL GSMVMQQPRP PVQQLGLSVS ESNIGMLASM NAYNSSNSRI  360
DLGMNLEHQH HQNQQQNSDS SDENPKDSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	5e-60	TCP family protein