PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17438.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 202aa MW: 23044.3 Da PI: 10.5662

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17438.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.8	1.8e-31	21	74	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+av++LGG++kAtPk+i+++m+vkgL ++h+kSHLQ+YR+ PIN17438.1 21 PRLRWTPQLHHHFVQAVHNLGGKNKATPKKIMQMMDVKGLKISHIKSHLQMYRS 74 8****************************************************7 PP
2	Myb_DNA-binding	54.3	3.1e-17	22	73	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av+ lGg+ t+k+I+++m kg+ ++ks++q+y+ PIN17438.1 22 RLRWTPQLHHHFVQAVHNLGGKnkaTPKKIMQMMDvKGLKISHIKSHLQMYR 73 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MMNNIDSEET RVRRYRKSLL PRLRWTPQLH HHFVQAVHNL GGKNKATPKK IMQMMDVKGL 60 KISHIKSHLQ MYRSMNDTTN SIEFKAYQEK KPNFTKWVPV RQVCRGLGQS STHGRHVKGL 120 LTCQERRKTA QKDMNVFSHE YQVEGTQGSS TSGTTKESAE IPRPNLELQG TSEINFLGLG 180 NPQTSESSST SPINLELTMS LH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-24	G2-like family protein