PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17565.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 320aa    MW: 36145 Da    PI: 5.4124
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH536.3e-173381254
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L ++++YI+ L
  PIN17565.1 33 RSKHSETEQRRRSKINERFQILRDLIPEN----DQKRDKASFLLEVIQYIQFL 81
                899*************************9....9*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MVRTLNHVED EETPDSSSPT EGRRVDQKGN ASRSKHSETE QRRRSKINER FQILRDLIPE  60
NDQKRDKASF LLEVIQYIQF LHEKLQMYEG SCQGWSPEPT KLTPWKINSG PVESFVDQSH  120
FERLLSGHED NVVHSPTVLS NARNSVELDF HGAALQKPTE KVPVSANQGL PLNMPLQPPM  180
FEGLSGQPHQ GFFPDAEQFT QQPQSQIWRG KSCLDDCSVP IYSRNEEELK TENGEDSISS  240
AYSQGLLISL TNALRSSGMD LSQSNISVQL DIGKRTNGRS TPAMFDMKDH ENSSCLNAID  300
PVHVGENYEH PQKRFRADQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-57bHLH family protein