PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17574.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Trihelix
Protein Properties Length: 200aa    MW: 23362.6 Da    PI: 7.1948
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix76.15.4e-2423105186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+ qe+++ + +r e++ ++ ++k++k lWe +s++m+e+g++rsp qCk+kw+nl +ryk ++++e +     ++++p++++++
  PIN17574.1  23 QWSMQETRQFLIIRAELDPTFMETKRNKLLWELISNQMKEKGYNRSPDQCKCKWKNLVTRYKGCETREAEW---MRQQFPFYNEMQ 105
                 7********************************************************************85...55689******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MDPYPFGEAG VSIDLGGGDR FPQWSMQETR QFLIIRAELD PTFMETKRNK LLWELISNQM  60
KEKGYNRSPD QCKCKWKNLV TRYKGCETRE AEWMRQQFPF YNEMQAIFNA RMQRMLWMEA  120
ESGAATAGSS SRKKAAVQYS SEEEDEINDD SGGGKKKRKM KMKMKMNEAT NPHSGNLNIV  180
DGVREMMDEF MKQQMETEMQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.12e-52Trihelix family protein