PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17677.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MIKC_MADS
Protein Properties Length: 217aa    MW: 24232.8 Da    PI: 9.7798
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.28.1e-27959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n + rqvtfskRr g++KKA+ELS+LCdae+a+i+fs tgkl+ yss
  PIN17677.1  9 KKIDNLTARQVTFSKRRRGLFKKAQELSTLCDAEIALIVFSATGKLFHYSS 59
                68***********************************************96 PP
2K-box47.86.2e-17881651996
       K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                 +++a L k++ +L   +++l+G+dL+ L + eL++Le+ +e++l+++ ++Kne +l++i++l+ ke +l een +L++
  PIN17677.1  88 NNHAMLSKQLVELSIGLKQLKGDDLQGLGIDELMKLEKLVESGLSRVGKTKNERFLTKISTLKTKESQLMEENARLKQ 165
                 678899**********************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MVRQKIEIKK IDNLTARQVT FSKRRRGLFK KAQELSTLCD AEIALIVFSA TGKLFHYSSS  60
SMMQLIQRHN AERSKLGQQP LNIQPGINNH AMLSKQLVEL SIGLKQLKGD DLQGLGIDEL  120
MKLEKLVESG LSRVGKTKNE RFLTKISTLK TKESQLMEEN ARLKQLAEKV RDARVNDFEQ  180
GNNSAESISN DCHGCCPGED KSGSDTSLKL GLPFSDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.18e-65MIKC_MADS family protein