PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17895.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 263aa    MW: 29016.8 Da    PI: 6.5499
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-19125175255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  PIN17895.1 125 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAAVAYDRAAYRMRG 175
                 7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MYQPVFGELT PVELPPVYRR SSSFSSLMPC LTETWGDLPL KVDDSEDMVI YGLLRDAVND  60
GWTPFSDVKA EPRFVDDGWT PLNDVKAEPR FEAEPDVGLP AVRTEYVAAP PPPPPAAAAR  120
PKGRHYRGVR QRPWGKFAAE IRDPAKNGAR VWLGTYETAE EAAVAYDRAA YRMRGSKALL  180
NFPHRIGLNE PEPVRVTGKR RSPEPSASTA STVTSCSDSG SPKRTKKEVA AERAEPEVES  240
QANVCQVECK RMPLPLGERI VVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-49ERF family protein