PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17937.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family S1Fa-like
Protein Properties Length: 69aa    MW: 7637.25 Da    PI: 10.8655
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17937.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA140.14.6e-44369470
        S1FA  4 akveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                + vea+G+nPGlivllv+gglll+flvgny+lyvyaqknlPP+kkkP+skkk+kre+lkqGv++PGe
  PIN17937.1  3 QDVEARGFNPGLIVLLVIGGLLLLFLVGNYALYVYAQKNLPPKKKKPISKKKMKRERLKQGVSAPGE 69
                579***************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    
MAQDVEARGF NPGLIVLLVI GGLLLLFLVG NYALYVYAQK NLPPKKKKPI SKKKMKRERL  60
KQGVSAPGE