PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17961.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TALE

Protein Properties

Length: 504aa MW: 56976.7 Da PI: 7.372

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.6	5.1e-09	295	332	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + PIN17961.1 295 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 332 664459******************************88 PP
2	BELL	113.2	1.4e-36	159	227	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk+k kLl++leeVd+rYk y++q++tv+ssFeavag g+ak+Y ++A+ka+SrhFrcLkd i+ qi PIN17961.1 159 ELQKRKFKLLQMLEEVDRRYKNYCNQMKTVVSSFEAVAGKGAAKVYSAMASKAMSRHFRCLKDGIMTQI 227 89*****************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MSYADFATHF EPSSEIYSLS NSGMEIIGFS SKNLDPQSHY SKQSDITNET LMVSRESSTT 60 WNHRVSLSLS NSFEVRQNYD FRFGPSSSRS VNNIQERGFQ IRNSKYLEPA QELLNEFCNL 120 GMNQSDEISK RKKVERSSSL WEDENFIKKQ SLYSLDLLEL QKRKFKLLQM LEEVDRRYKN 180 YCNQMKTVVS SFEAVAGKGA AKVYSAMASK AMSRHFRCLK DGIMTQIKAT KKAMGDKDTA 240 VPGTTKGETP RLRLLDETLR QQKALQQMNI MESHPWRPQR GLPEKSVSVL RAWLFEHFLH 300 PYPSDVDKHI LARQTGLSRS QVSNWFINAR VRLWKPMVEE MYLEDLKEGE NPTHEDQKPT 360 QDQLTRVDSE CLSSVINNPG KNDGKQNIKT LQNDPSFGGD EYGAMQFDFS SYNGGGAAVS 420 YLNENGGRQN YGGGVSLTLG LHQHGGGGGG PSLAFSPASQ GSFFYSREQM EDCQTVQYSI 480 LDSENQNLPY RNVTGAQLLH DLAG

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MSYADFATHF EPSSEIYSLS NSGMEIIGFS SKNLDPQSHY SKQSDITNET LMVSRESSTT  60
WNHRVSLSLS NSFEVRQNYD FRFGPSSSRS VNNIQERGFQ IRNSKYLEPA QELLNEFCNL  120
GMNQSDEISK RKKVERSSSL WEDENFIKKQ SLYSLDLLEL QKRKFKLLQM LEEVDRRYKN  180
YCNQMKTVVS SFEAVAGKGA AKVYSAMASK AMSRHFRCLK DGIMTQIKAT KKAMGDKDTA  240
VPGTTKGETP RLRLLDETLR QQKALQQMNI MESHPWRPQR GLPEKSVSVL RAWLFEHFLH  300
PYPSDVDKHI LARQTGLSRS QVSNWFINAR VRLWKPMVEE MYLEDLKEGE NPTHEDQKPT  360
QDQLTRVDSE CLSSVINNPG KNDGKQNIKT LQNDPSFGGD EYGAMQFDFS SYNGGGAAVS  420
YLNENGGRQN YGGGVSLTLG LHQHGGGGGG PSLAFSPASQ GSFFYSREQM EDCQTVQYSI  480
LDSENQNLPY RNVTGAQLLH DLAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	426	434	GGRQNYGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-137	TALE family protein