PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17990.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 235aa    MW: 27265.5 Da    PI: 6.7619
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.72.8e-10123205179
                 EEEE-..-HH.HHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-E CS
          B3   1 ffkvltpsdv.lksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDf 79 
                 f+k+l  sd+ lk++rl++pk++ae++    +     +  ++++  +g++We+ ++y+ ++g+  yvl+ G +++  +++ + gD+
  PIN17990.1 123 FEKILYASDAdLKLARLIIPKRCAETFfpdlS--GLHGLHIKIQYIEGNEWEFHYRYWINGGSriYVLE-GLRDYLVSKQWQPGDT 205
                 88999988872566**********999**662..445668*****************776666668888.********99999996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MASSSRMSCF QCQDSSSKPD HFRNGWRLHS GEYAQLCPRC GSAYEEGRFC ETFHSNDDGW  60
RDCESCGKAR NRFLSLEPEI RDRESYQESS GQVAVEAQYW SRVTDLELQQ VSRNPKSTVT  120
PLFEKILYAS DADLKLARLI IPKRCAETFF PDLSGLHGLH IKIQYIEGNE WEFHYRYWIN  180
GGSRIYVLEG LRDYLVSKQW QPGDTESSSK VKWKIGERAK LQLDNVIMWF CSTSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30470.17e-32B3 family protein