PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN18033.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 323aa    MW: 35011.1 Da    PI: 10.3111
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN18033.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.23.7e-1394138347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W++eE+ l++ + ++ G+g+W+ I+r   k+Rt+ q+ s+ qky
       PIN18033.1  94 PWSEEEHRLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKY 138
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MAAIHSKCSE YSAVDDGQSS EVSSGGGGGG GKGFMLFGVR VMTEGSFRKS ASMNNLAQFD  60
QQPQDSTNDV AAGYASDDVV HASGRSRERK RGVPWSEEEH RLFLLGLQKV GKGDWRGISR  120
NYVKTRTPTQ VASHAQKYFL RRNNHNRRRR RSSLFDITTD AVVGSAIEDQ MHQENLSQLP  180
KVQQHNLSKN LEKFPIPTFP VAISPLVVPI TSTENPTENL TLGQVNQLNN SPKPIRPIPI  240
LPVPPSSKMA SLNLNKTATP EQRPSLSLNL SISSQSPPPP PPSSNQESPP SNQQSPPARH  300
ATTFQAMPGN FNGSGGDSII SVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.22e-62MYB_related family protein