PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN18287.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRF

Protein Properties

Length: 178aa MW: 20130.2 Da PI: 10.2867

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN18287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	71.6	9.2e-23	91	132	1	42
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrks 42 d+ep+rCrRtDGKkWRCsr+v+eg+k+C +H+hrgr r r+ PIN18287.1 91 DPEPRRCRRTDGKKWRCSRNVVEGQKYCSSHMHRGRLRPRNN 132 79************************************9986 PP
2	QLQ	46.3	1.3e-16	28	62	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT++Qlq+L+ Q l+y y+ a+ PvP +L+++i++ PIN18287.1 28 FTWMQLQELELQSLIYNYIKAGIPVPTHLILPIWR 62 9********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MEAPSPPCKI SRVIQSGKAT AARVKHGFTW MQLQELELQS LIYNYIKAGI PVPTHLILPI 60 WRSFAGCIAH QIYPNCLGYN PLYFDPKSSM DPEPRRCRRT DGKKWRCSRN VVEGQKYCSS 120 HMHRGRLRPR NNLQPPPAAT AAEETCSTNK FSSTNLSIPC SSKVKRVTQG YDPIRGNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	3e-30	GRF family protein