PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN18321.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 261aa    MW: 29503.2 Da    PI: 6.3174
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN18321.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.76.5e-1681133155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn+ Er RR+riN+ +++Lr+llP+ +   +skKls  +++ ++ +YI +Lq
  PIN18321.1  81 KKLNHNASERDRRKRINNLYSTLRSLLPSdD---QSKKLSIPATVSRVLKYIPELQ 133
                 6789*************************66...*******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MLALSPQFCS SGWFLDMEDP IISHEQENLN YLSTGGRTET SDSIELHSPT SKIPPTDGEF  60
ASFFDGFHHE GHNDDDNKMV KKLNHNASER DRRKRINNLY STLRSLLPSD DQSKKLSIPA  120
TVSRVLKYIP ELQKEVERLI QKKQTLISNI SRAEDSSVDL KNHRRKSIQK SSFPAVSATR  180
ISDREVIIQS SIPKAEKGSF SEAVINLEEE GFVVMNASCV ESFGGSVFCN LHIQAQGSQV  240
IDVEMLKEKV WPLYEKGERV Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-50bHLH family protein