PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN18361.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 225aa MW: 25559.1 Da PI: 7.8797

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN18361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.1	3.1e-32	151	209	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+ PIN18361.1 151 LDDGYKWRKYGQKIVKNSLHPRSYYRCTHSSCRVKKRVERLSEDCRMVITTYEGRHNHS 209 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MEGERGLSLP IYDHHHLQNI NSFSAHQNQE MGFVQFDHDH NQVLSFLVAP APPSQPLDSA 60 AAKATTASTH NGSLGFNHNE LVNRPSWHND QVGGGALDPK AVNDENCSGN TNEGGNSWWR 120 SSSSEKGKVK IRRKLREPRF CFQTRSDVDV LDDGYKWRKY GQKIVKNSLH PRSYYRCTHS 180 SCRVKKRVER LSEDCRMVIT TYEGRHNHSP CDDSNSSEHE CFTSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	136	KIRRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	2e-72	WRKY family protein