PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN18485.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 115aa MW: 12880 Da PI: 5.6851

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN18485.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00031	89	109	1	21
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 y C+ C++sF ++ L+ H + PIN18485.1 89 YACTTCNRSFQSHRALEGHKS 109 89***************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 115 aa Download sequence
MKFVQNHSEK QNDKVEDVDS SSLVADDHQF KKRKTESAID VAEEKLVEAE AKAEAESKAV 60 TESEAEVESK AEAEKINQES SGTSTRQNYA CTTCNRSFQS HRALEGHKSS RNKFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56200.1	1e-06	C2H2 family protein