PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN18611.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 643aa MW: 74845.7 Da PI: 7.1964

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN18611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.3	3.9e-21	18	109	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g ++kr++vC+++g++ +kk t +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel PIN18611.1 18 EYYGNFARRNGFSIRKERSRLSPQLG-VYKRDLVCYRSGFAPARKKLTGEHQRDRKSVRCGCDAKMYLSKEVvdgVSQWFVVQFSNVHNHELL 109 59******************8888.***************************************99867789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
MVAPYVGMVF KSDDEAFEYY GNFARRNGFS IRKERSRLSP QLGVYKRDLV CYRSGFAPAR 60 KKLTGEHQRD RKSVRCGCDA KMYLSKEVVD GVSQWFVVQF SNVHNHELLE DEQVRLLPAY 120 RKIHESDQER ILLLSKAGFP IHRIVKVLEL EKGIHGGQLS FLERDVRNFI QNRKKVVQEN 180 DALLTEKREN DILDLLEACR SSKEADPYFV YDVAVDENDK VENIAWSFGD SVHAYDMFGD 240 VVYFDSTYRS MSYGMLFGAW LGINNHGRTL FFGCALLQDE TPRSFAWTLQ AFLRFMKGRY 300 PQTIITDIDP VLREAIRSEL PNTKHVISLY SVLPRTSSWF SLPLGSRFPE FKYEFEELCH 360 LESTEEFEFR WNQMVSHFGL NSDKHIALLF SLRLCWALPY TRGCFLARMD STSYWKPVDA 420 LMKGVIKTQS CLRGLLEQVG LLSNYKMHSH EGPQYLHLRT CLPIEEHARS ILTPSAFNWI 480 QHEMVLAMQY AATEMANGSY LVRHFKKVDG ERLVIWIPED EQIHCSCKEF ESTGILCRHA 540 LRVLLLKNYF QLPNRYLLDR WRQESSLCFY SGQSNLKLKD EWYQEFNSLA ETLFSEAMLT 600 KERSDFAHRE VAKELRRLIS HVRDMPAVDE AVVGVTLSPT NVL

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

MVAPYVGMVF KSDDEAFEYY GNFARRNGFS IRKERSRLSP QLGVYKRDLV CYRSGFAPAR  60
KKLTGEHQRD RKSVRCGCDA KMYLSKEVVD GVSQWFVVQF SNVHNHELLE DEQVRLLPAY  120
RKIHESDQER ILLLSKAGFP IHRIVKVLEL EKGIHGGQLS FLERDVRNFI QNRKKVVQEN  180
DALLTEKREN DILDLLEACR SSKEADPYFV YDVAVDENDK VENIAWSFGD SVHAYDMFGD  240
VVYFDSTYRS MSYGMLFGAW LGINNHGRTL FFGCALLQDE TPRSFAWTLQ AFLRFMKGRY  300
PQTIITDIDP VLREAIRSEL PNTKHVISLY SVLPRTSSWF SLPLGSRFPE FKYEFEELCH  360
LESTEEFEFR WNQMVSHFGL NSDKHIALLF SLRLCWALPY TRGCFLARMD STSYWKPVDA  420
LMKGVIKTQS CLRGLLEQVG LLSNYKMHSH EGPQYLHLRT CLPIEEHARS ILTPSAFNWI  480
QHEMVLAMQY AATEMANGSY LVRHFKKVDG ERLVIWIPED EQIHCSCKEF ESTGILCRHA  540
LRVLLLKNYF QLPNRYLLDR WRQESSLCFY SGQSNLKLKD EWYQEFNSLA ETLFSEAMLT  600
KERSDFAHRE VAKELRRLIS HVRDMPAVDE AVVGVTLSPT NVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein