PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN18654.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 314aa    MW: 33761.5 Da    PI: 7.0782
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN18654.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.85.2e-17231267135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg ++  Tp++Rrgpdg++tLCnaCGl+++ kg+
  PIN18654.1 231 CRHCGISSksTPMMRRGPDGPRTLCNACGLKWANKGV 267
                 *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MYGPPHASMN DTTNVQHHRR REGTTHIDQD EDDADDVVDY SNGDDTINNP PSQIRYEPAN  60
NSHSPHALAG GGAMEVVEGI GSDALYASAA APAAGEGGAD HLTLSFQGEV YVFESVTPEK  120
VQAVLLLLGG CEVPTGVPTP GMIPQNHKNL GGYPGRSSQP QRAASLNRFR EKRKERCFDK  180
KIRYTVRKEV ALRMQRKKGQ FTSSKLVSDE PGSSSADCNG SSAQEEQETL CRHCGISSKS  240
TPMMRRGPDG PRTLCNACGL KWANKGVLRD LSRAPITGMQ HHVLKPGQVP DGESNGKRTV  300
VTPIDGINSS SGDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.26e-81GATA family protein