PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN18664.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 214aa MW: 23677.5 Da PI: 10.0351

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN18664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00024	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H PIN18664.1 57 FSCNYCHRKFYSSQALGGHQNAH 79 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MESPILDPCN HPPNPTPQET NNHQEQEPKI KNSHNLTLDL TLSSKDINHN ESEPRVFSCN 60 YCHRKFYSSQ ALGGHQNAHK RERTIAKRSG SGGGAAFRHH DMAVHRYLSM ASLPLHGSVN 120 RSLGIQAHSM IHKPSFAASR VQIYDRKPQP GIGRLAAEIH QVGSSGSGGA ARFDGGRRFA 180 PVVEGIGVFR WDNSSYLKTS NQDEIKKLDL SLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80730.1	7e-37	C2H2 family protein