PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN18669.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 164aa    MW: 18616.2 Da    PI: 8.4856
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN18669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.5e-19756255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aaka+++a++ + g
  PIN18669.1  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAAKAYDEAARIMCG 56
                69******9.**********8.....334**********************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAAKAYDEA ARIMCGPRAR  60
TNFSYNPNEA QSSASKLLSA TLLAKLQKCH MASLAMAKKP ALNNKGNHQE NEKKVEIKCE  120
RVSENVEKVK SVEEDDDHVI EQMIQELLDY GSVEVCCVRG NSSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-42ERF family protein