PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN18973.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 131aa    MW: 14060.6 Da    PI: 8.3335
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN18973.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA481.7e-1592121130
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyy 30 
                 C+ Cg+ +TplWR+gp g+ tLCnaCGl++
  PIN18973.1  92 CHACGADNTPLWRKGPGGPQTLCNACGLKH 121
                 9**************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MENPKDGSGN NRNTKIDLTL KLGPSIDDKQ SQEEEKDVVG QGNENIEFGG SSSAYGGVEA  60
GSTNLLLYQG LSSQNLPSPS RKRPNTNNMK ICHACGADNT PLWRKGPGGP QTLCNACGLK  120
HLRNIKKHNA E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-11GATA family protein