PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19000.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 299aa    MW: 34600.8 Da    PI: 6.5394
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00041158182123
                 EEETTTTEEESSHHHHHHHHHH..T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                 + C+ C+k ++  ++++ H+++  H
  PIN19000.1 158 FYCELCNKQYKLAMEFEAHLSSydH 182
                 79*****************987555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDNRWYTKKE MYNKRQQKGV EAYEATVLED LAEDFRLPID HRVTENVDLD NVEQASLDTQ  60
LTSSNVGFRL LQKMGWKGKG LGKDEQGIIE PIKSGIRDAK LGLGKQEEDD YFTAEENIQR  120
RKLDIEVEET EELAKKREVI AEREQKIQSE VKEIRKVFYC ELCNKQYKLA MEFEAHLSSY  180
DHNHRKRFKQ MRDMHGSSSR DDRQKREQQR QEREMAKFIQ MADVHKQQQQ QMQNQEETGT  240
IPTPAAVSSA TALADQEQRK TLKFGFTAKG STPKASVTTS AKKPKVAIAS VFSNDSDEE