PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19004.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 152aa    MW: 17246.7 Da    PI: 5.7173
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2401e-1258107254
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 
                 +y+GVr+   +g+++AeIrdp     k  r +lg++   eeA  a+++ + +l+
  PIN19004.1  58 RYRGVRRLL-WGKFAAEIRDP---DrKGSRLWLGTYEMLEEADLAYDRVAFQLY 107
                 7*****776.**********8...3245********************999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MDLAFLDSIQ DYLLSDFDFS HDLLCDNIVT LVSDDEQISS EMVEELLCNN NGDAGERRYR  60
GVRRLLWGKF AAEIRDPDRK GSRLWLGTYE MLEEADLAYD RVAFQLYSSK AGVNFPHLVR  120
SGVLKPTRVT KRSHGSMAPL NVPSKKMKMA VA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130137TKRSHGSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.15e-30ERF family protein