PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19005.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 164aa    MW: 18586 Da    PI: 5.8204
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-1971121255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrdp     k  r +lg++ t+eeAa a+++a+ kl+g
  PIN19005.1  71 SYRGVRRRP-WGKFAAEIRDP---DrKGYRLWLGTYETPEEAALAYDQAAFKLRG 121
                 69*******.**********8...3245*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MDLALLDSIQ NYLLSDFDFP QDFQCNNIAI PVSDDDQFSS QMIEELLCND SKEVDASSEG  60
VVNALPVDWK SYRGVRRRPW GKFAAEIRDP DRKGYRLWLG TYETPEEAAL AYDQAAFKLR  120
GSRARVNFPH LVGSGVELTR VTKRSHGSLD RPNVNPKKMK MAMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.16e-35ERF family protein