PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19102.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 227aa MW: 25735.6 Da PI: 8.6344

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.4	7.7e-19	37	82	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd++l ++v+ +G+++W++I++++ gR++k+c++rw + PIN19102.1 37 RGPWSAEEDKILTRLVETYGPRNWSLISKYIK-GRSGKSCRLRWCNQ 82 89***************************9.*********985 PP
2	Myb_DNA-binding	56.5	6.3e-18	91	133	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEd+ + a++++G++ W+tIar ++ gRt++ +k++w++ PIN19102.1 91 PFSAEEDDAIMAAHEKYGNR-WATIARLLP-GRTDNAVKNHWNST 133 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MDLFHRCSSA SNSSSSECSS DSSSLRPRNG DKSERIRGPW SAEEDKILTR LVETYGPRNW 60 SLISKYIKGR SGKSCRLRWC NQLSPTVEHR PFSAEEDDAI MAAHEKYGNR WATIARLLPG 120 RTDNAVKNHW NSTLKRRYQI KQQQKQRVDE EAKNVASASS VSNFEENDPM TELSLALPGM 180 SGAAGVTERR EENFPTGFWD VMRNVIAREV REFVTTSFPE SSSGFHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	1e-54	MYB family protein