PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19237.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 162aa    MW: 17440.6 Da    PI: 8.9058
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19237.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.000193961123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C++ F ++  L  H++ H
  PIN19237.1 39 FECQHCHRKFANSQALGGHQNAH 61
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MEDNSDYPTN SSSEVKLFGF SVKSCEDVLP KHDLENKRFE CQHCHRKFAN SQALGGHQNA  60
HKKERQRLKR AHFVADHRRL GSAVHMINPH GSLIGQGVGA RPHGGYGARF VPLGEPHVLS  120
GVPLRFPAGF APPRAGVLGG GRGEVAGPST DGGEGLDVDL HL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58070.13e-12C2H2 family protein