PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19239.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 159aa    MW: 17116.3 Da    PI: 10.4536
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA596.4e-193367135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++
  PIN19239.1 33 CVDCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRR 67
                ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MDLSDKGSEC EEMSSQTPTP DRVSSDGSNV KTCVDCGTSK TPLWRGGPAG PKSLCNACGI  60
RSRKKRRALM GVTKEEKKTK KSSSGKNISH QSLSSNSSTS SSGDSTSKIG DSFKKKLWAF  120
GRDVALQRPR SNTTRRRKLG EEEQAAFLLM ALSCGSVYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.14e-33GATA family protein