PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19242.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ARR-B
Protein Properties Length: 672aa    MW: 74107.3 Da    PI: 6.6455
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19242.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.91.1e-28213266155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kpr++W+ eLH++Fv av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl
  PIN19242.1 213 KPRVVWSVELHQQFVTAVNHL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266
                 79*******************.********************************8 PP
2Myb_DNA-binding39.11.8e-12215265148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e+++++v av+ lG +   +k+I + m+  g+t++++ s++qky+
       PIN19242.1 215 RVVWSVELHQQFVTAVNHLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 265
                      678***********************************************7 PP
3Response_reg77.64.5e-26331411109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+vdD+p+ +++l+++l++ +y ev+++  +e al+ l++++  +D+++ D+ mp+mdG++ll++   e  +lp+i+++a +++  + + +  Ga 
    PIN19242.1  33 VLVVDDDPTCLRILEKMLKNCRY-EVTTCNRAEIALKFLRDNKngYDIVISDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADDSKHVVMKGVTHGAC 127
                   89*********************.***************888889**********************6644.8************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +e+l +
    PIN19242.1 128 DYLIKPVRMEALKN 141
                   *********99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 672 aa     Download sequence    
MDLGVKPLSF TSSSASCKSS DGVSDQFPAG LRVLVVDDDP TCLRILEKML KNCRYEVTTC  60
NRAEIALKFL RDNKNGYDIV ISDVHMPDMD GFKLLEHVGL EMDLPVIMMS ADDSKHVVMK  120
GVTHGACDYL IKPVRMEALK NIWQHVVRKK KHEWKEKDFE QSGSVDDGER QQKPPEDVDY  180
SSSVNEGNWK NSKKRKDEED EAEERDDTST LKKPRVVWSV ELHQQFVTAV NHLGIDKAVP  240
KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVAQHQNG LGSSFMGPVD ATFGPMSSLN  300
GVDLQALAAS GQLPPQSLAT IQAAALGRPT TKSPIPVPLV DQRNIFSFEN PKLRFVDGQQ  360
QQNNNSKQVN LLHGIPTNMD SKQLATLHQS AQSFGNMNMH VHSQASQSNS LLTQMVQPQS  420
RAQILHEING THVSSLPSSV GQPVLSQGIP SAVMGRNGID NARGPPYTSV SQPSNVVDFS  480
RSQSTEFPVN SFSLLSNSGI PSLTSKLPDE VNSEMKGSRG FIPNYDVFND LNQNRNQNWR  540
LQNVGSTFDA PRPSNVQDGI TVSPSVLIQQ RFSSNHNSGQ SQIPSVNKAP FSVAEGLGNT  600
PTLGQQTNAP IADNPLRIKS ERPDMGFQNG LFPNHFGQED LMSALLKQQQ EGIGPVENDF  660
GFDGYHMDNL PV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.20.0ARR-B family protein