PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19302.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 237aa MW: 26786.6 Da PI: 4.7607

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	109.7	3.3e-34	15	139	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrF+Ptdee+v yL++k+ +++l++ i+++ +i++++Pw+Lp + e++ yfFs+++ ++ r+ t+sgyWk+tg+ k++ ++ ++ PIN19302.1 15 LPPGFRFEPTDEEIVFLYLARKTFSNPLPA-VLIPDIdNILSFDPWELPGN---LEEDRYFFSNKEDNN----RSGTGTRSGYWKSTGSVKRISCSkTT 105 79***********************999.67999978******54...45789998865....55666889********997466 PP NAM 98 elvglkktLvfy....kgrapkgektdWvmheyr 127 + vg++k++vfy +++ +++++tdW+mhey PIN19302.1 106 AIVGIRKSFVFYkvgkHENGRRAVRTDWIMHEYY 139 67******5443244555679******7 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MEKFMSVVGD GVSKLPPGFR FEPTDEEIVF LYLARKTFSN PLPAVLIPDI DNILSFDPWE 60 LPGNLEEDRY FFSNKEDNNR SGTGTRSGYW KSTGSVKRIS CSKTTAIVGI RKSFVFYKVG 120 KHENGRRAVR TDWIMHEYYI ALSENTANND TTINQMNVNS QGSLVRIGNW TLCHIFLEKT 180 STKTQVDEDD NYKNRSYDLI TEDLSDTDSC SASSSSAQYY SDSSIFTDKD EVSSSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	3e-50	NAC family protein