PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19325.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 172aa    MW: 19262.8 Da    PI: 6.8735
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19325.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH413.5e-131061255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                r+  + +E++RR+++++  ++L +l+P++   p +  +s ++ Le A++YIk+Lq
  PIN19325.1 10 RADRKTIEKNRRSQMKDLCSKLSSLVPHQ---PTTElVSLSDQLEGATDYIKKLQ 61
                677889**********************8...77777*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MDHYSHSSSR ADRKTIEKNR RSQMKDLCSK LSSLVPHQPT TELVSLSDQL EGATDYIKKL  60
QLKLEKLKQK KNFLMGNSQN PDIKGLQIPA IDVHASGSDL DVILTTGPDC QFMFTETIRI  120
LHEEGAQVVS AGFSVVDQTV FHSIHSKIGD CAVEDEASRI SERLRKFACD FN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-30bHLH family protein