PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19395.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 313aa MW: 33484.9 Da PI: 9.1072

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19395.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.5	1.4e-35	58	166	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............ 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLl qa+p+i+++tgt++++as+ a+ s+s++ ss++ PIN19395.1 58 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLHQAEPSIIAATGTGTIPASALAAAGGSVSQQGSSISsglhqkiddlgv 156 789******************************************************************888555555555545554445444445555 PP TCP 89 .........k 89 PIN19395.1 157 ggsgsgsrtP 166 5555555550 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MDPKNSKQPQ EMPSFLNLPQ SSSPTNHNNN TEQNKPSEVK DFQIMIADKE ESKKQTLAPK 60 RSSNKDRHTK VEGRGRRIRM PALCAARIFQ LTRELGHKSD GETIQWLLHQ AEPSIIAATG 120 TGTIPASALA AAGGSVSQQG SSISSGLHQK IDDLGVGGSG SGSRTPWPVI GGNLGRSHVG 180 SSTGLWPPVG VSGFGFQSSS SSPSSSGPSM AAESSNYLQK MGFPSFDLPT GNMGSMSFTS 240 ILGANSHQLP GLELGLSQDG NFGVLNPQAF SQIYQQIGQT RLMHQNHHQQ HQNQHHQQQQ 300 QPSSKDDSQE SGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-70	TCP family protein