PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19515.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 560aa MW: 61633.8 Da PI: 9.0475

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.6	1.3e-09	444	491	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +K Ka +L + ++Y++sLq PIN19515.1 444 SHSLAERARREKISERMKILQDLVPGC-----GKvTGKAVMLDEIINYVQSLQ 491 8************************.....6669**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MTTKTQKKDK NSPRNSKKDS ISVQINEKTP LLTRKKIESS SFSRQDFNGA SFEGAVFNLS 60 TTIMGAGIMA LPATMNVLGL GLGIAVVVFV AVLTEFSVGM LLRYSKACGA DSYGGVMGDA 120 FGEVGRGILQ VCVVINNIGV LVVFMIIIGD VLSGSSSSGV HHPGVLESWF GKHWWNARFF 180 VLVMTTLCVL TPLACFKRID SLRHTSALAV FLALVFLFIT TAIAIVKWVQ GTTTTPRFLP 240 DITDLNSIWS LFTVVPVLVT AYVCHFNVQS IANELEDRSR IKSVVRTSLA LCSIIYIVTG 300 FFGFLLFGNS TLDDVLSNFD TNVGIPFGSE LNDAVRVSYA LHLMLVFPVI FYPFRLNLDG 360 LLFPSSVPLA SDNRRFSLLT VGLISVAFLG ANFIPSIRDA FQFTSATAAV CLWFIFPVAI 420 ALRSDPPKKE YIHVRARRGQ ATDSHSLAER ARREKISERM KILQDLVPGC GKVTGKAVML 480 DEIINYVQSL QRQVEFLSMK LATVNPRLDF NIERFLAKDA PRIWDDELHN VVHNSFNLTV 540 SLNSQDLSAS LPPGHMKAEP

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MTTKTQKKDK NSPRNSKKDS ISVQINEKTP LLTRKKIESS SFSRQDFNGA SFEGAVFNLS  60
TTIMGAGIMA LPATMNVLGL GLGIAVVVFV AVLTEFSVGM LLRYSKACGA DSYGGVMGDA  120
FGEVGRGILQ VCVVINNIGV LVVFMIIIGD VLSGSSSSGV HHPGVLESWF GKHWWNARFF  180
VLVMTTLCVL TPLACFKRID SLRHTSALAV FLALVFLFIT TAIAIVKWVQ GTTTTPRFLP  240
DITDLNSIWS LFTVVPVLVT AYVCHFNVQS IANELEDRSR IKSVVRTSLA LCSIIYIVTG  300
FFGFLLFGNS TLDDVLSNFD TNVGIPFGSE LNDAVRVSYA LHLMLVFPVI FYPFRLNLDG  360
LLFPSSVPLA SDNRRFSLLT VGLISVAFLG ANFIPSIRDA FQFTSATAAV CLWFIFPVAI  420
ALRSDPPKKE YIHVRARRGQ ATDSHSLAER ARREKISERM KILQDLVPGC GKVTGKAVML  480
DEIINYVQSL QRQVEFLSMK LATVNPRLDF NIERFLAKDA PRIWDDELHN VVHNSFNLTV  540
SLNSQDLSAS LPPGHMKAEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	2e-52	bHLH family protein