PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19620.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 237aa    MW: 26103.6 Da    PI: 7.417
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.7e-1278126455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++  rE++RRdr+N++f eL  ll +    + +K +K++iL  Av+ + +Lq
  PIN19620.1  78 SKACREKQRRDRLNDKFMELGALLEPG---RPPKTDKSAILIDAVRMVTQLQ 126
                 5678**********************8...89******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MVTPENTNWL YDYGFEDISV PDGNFSAHNT GFSWPMQALN GSSNASVEID GSLGESDVQK  60
ETGSKKRART ESCAPSSSKA CREKQRRDRL NDKFMELGAL LEPGRPPKTD KSAILIDAVR  120
MVTQLQGEAQ KLKDSNLNLQ EKIKELKAEK NELRDEKQRL KAEKEKLEQQ LKTMNAPQPG  180
FLPAPPAMPA AFAAAQSQAP GNKLVPIISY PGVAMWQFMP PAAVDTSQDH VLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-96bHLH family protein