PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19672.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 159aa    MW: 17861.7 Da    PI: 9.7747
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.7e-05881271954
                 HHHHHHCTSCC.C......TTS-STCHHHHHHHHHHHHHH CS
         HLH  19 afeeLrellPk.as...kapskKlsKaeiLekAveYIksL 54 
                   ++L +llP+ +      +s K s   +L+++++YI++L
  PIN19672.1  88 LVSKLHQLLPEiRNsssTRRSSKTSANKVLQETCNYIRNL 127
                 568999****987788888899999999**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MHTLITTFSL YISSNNLLRV CVGVGVCVCV LTLYLVKKYS SGFSLCTHKL SHSSPKLYFN  60
ILRMSGRRSR QLPSGSSSRI TDDQIIELVS KLHQLLPEIR NSSSTRRSSK TSANKVLQET  120
CNYIRNLHKE MDDLSERLSQ LLSTIDADSP EAAIIRTLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.13e-34bHLH family protein