PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19688.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family BBR-BPC
Protein Properties Length: 308aa    MW: 33848.3 Da    PI: 9.9923
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19688.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind320.45.5e-9813081301
   GAGA_bind   1 mdddgsre.rnkgyyepa.aslkenlglqlmssiaerdaki.........rernlalsekkaavaerd.....maflqrdkalaernkalverdnklla 83 
                 md +g+++ rn+g++ep  ++lk++lglqlmss++e+             + + +  s++ ++++++      +++   d ++++        ++k+l+
  PIN19688.1   1 MDGNGNMNlRNWGFFEPPtTTLKSHLGLQLMSSMSEKPLFGgavrdnqhtQPSPMMASTNGGPFHHHRvggisESHISMDYWMSQ-------NREKYLN 92 
                 999*************9989**************98754334444433222222222233344455547999988889999**99.......6678888 PP

   GAGA_bind  84 lllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkes 182
                 +l  ++  a    ++ +v+++t+s++s+q  ++ +l+++   ++e e++ ++  +    ++  ++ kk+++ +  + ++k+kk++ k +  ++++ ++s
  PIN19688.1  93 VLSGNHHHA-YYQSNFGVSPETSSAHSIQLPQQVNLSKNENVISEVEEMCEERDNGGGGSSGAVAVKKRGAGKVPNCAPKEKKPRTKAPRATRDEPTPS 190
                 888777654.4447899*************999999988888777777666665566666666666665555555568899999999999999999999 PP

   GAGA_bind 183 aderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsn 281
                 + +r++a+kk  ++v+ng+++D+s +P+PvCsCtG+++qCY+WG+GGWqSaCCtt +S+yPLP+stkrrgaRiagrKmS gafkk+LekLa++Gyd+sn
  PIN19688.1 191 V-PRARAPKKRAEVVINGINMDISDIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGLSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLATDGYDFSN 288
                 7.7************************************************************************************************ PP

   GAGA_bind 282 pvDLkdhWAkHGtnkfvtir 301
                 p+DL+++WAkHGtnkfvtir
  PIN19688.1 289 PIDLRSYWAKHGTNKFVTIR 308
                 *******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MDGNGNMNLR NWGFFEPPTT TLKSHLGLQL MSSMSEKPLF GGAVRDNQHT QPSPMMASTN  60
GGPFHHHRVG GISESHISMD YWMSQNREKY LNVLSGNHHH AYYQSNFGVS PETSSAHSIQ  120
LPQQVNLSKN ENVISEVEEM CEERDNGGGG SSGAVAVKKR GAGKVPNCAP KEKKPRTKAP  180
RATRDEPTPS VPRARAPKKR AEVVINGINM DISDIPIPVC SCTGTPQQCY RWGSGGWQSA  240
CCTTGLSMYP LPMSTKRRGA RIAGRKMSIG AFKKVLEKLA TDGYDFSNPI DLRSYWAKHG  300
TNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.15e-83BBR-BPC family protein