PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19754.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 234aa MW: 24452.9 Da PI: 8.5976

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	81	103	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC++Cgk Fs+ L H +H PIN19754.1 81 YKCSICGKGFSSYQALGGHKTSH 103 9***********99998888777 PP
2	zf-C2H2	12.9	0.00034	141	163	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F++ L H r+H PIN19754.1 141 HECSICHKNFPTGQALGGHKRKH 163 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MAIEAINSLG AAVQTTSNRR ADGAGLANDN DSWRKPKRSK LVSDEEYLAG CLVMLSRSDG 60 DSRDTSSAAA SESTPKIIAS YKCSICGKGF SSYQALGGHK TSHRNRPHGG GGAAASENNK 120 PSTSTSTATT DGSDYVNGRR HECSICHKNF PTGQALGGHK RKHYEGIIGR NAKIGLNSLA 180 GISGSSSVTS TISGGGTSQS HGGDGDDDVT PFRRNLDLNL PPPVELDLRL NFLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19580.2	6e-29	C2H2 family protein